Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKRASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGADDKIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFH-KGSRRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKATTREEINEYLRQMAMHSDLQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATIC-NDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
| 4O59 Chain:O ((7-329)) | --------------------------------------------------------------------------------------------------------------------GFGRIGRLVTRAAFN-SGKVD------IVAINDPFIDLHYMVYMFQYDSTHGKFNGTV--KAENGKLVINGKAITIFQERDPANIKWGDAGAE--YVVESTGVFTTMEKAGAHLKG-GAKRVIISAPSADA-PMFVMGVNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDEIKKVVKQ-ASEGPLKGILGYTEDQ-VVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173408 for 2780 contacts (-62.4/contact) +
2D Compatibility (PS) -34859 + (NN) -15068 + (LL) 9892
1D Compatibility (HY) -20000 + (ID) 6950
Total energy: -240393.0 ( -86.47 by residue)
QMean score : 0.566
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