Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSI-AITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDA-TKALQTAALARGNHDFAAQWAGQGAALAREL-PAAELLRTLVEELRG----------- |
| 2GJL Chain:A ((3-326)) | VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVP----------------------------------YAEYRAAIIEAGIRVVETAGN-DPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDD-------IPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186762 for 2780 contacts (-67.2/contact) +
2D Compatibility (PS) -34356 + (NN) -24111 + (LL) 3080
1D Compatibility (HY) -10800 + (ID) 4850
Total energy: -257799.0 ( -92.73 by residue)
QMean score : 0.486
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