Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLA----------------GGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFK-----LRKGPVFTHLLLADEINRAPAK------------TQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQ-RIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGE------FVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 1OFH Chain:A ((8-299)) | ---------------------------EIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGY-VGKEVDSII-RDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMV-KTDHILFIASGAFQV-ARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTE---------------QYKALMATEGVNIAFTTDAVKKIAEAAFRVNE---KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEV---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121967 for 1985 contacts (-61.4/contact) +
2D Compatibility (PS) -27219 + (NN) -10699 + (LL) 5456
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -161229.0 ( -81.22 by residue)
QMean score : 0.383
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