Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGED--LL---------------------------------QRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCREAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVATLRGQV---LPAIRLG-TPHTFYDYDAKY--LAS--DTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSREARG
1E4E Chain:A ((2-342))----------------NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYSAVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDR--PVAATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQAVSGCEVGCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLALK---


General information:
TITO was launched using:
RESULT:

Template: 1E4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117774 for 2499 contacts (-47.1/contact) +
2D Compatibility (PS) -33379 + (NN) -19683 + (LL) 780
1D Compatibility (HY) -20800 + (ID) 4850
Total energy: -195706.0 ( -78.31 by residue)
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_1E4E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1E4E-query.scw
PDB file : Tito_Scwrl_1E4E.pdb: