Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLADI |
| 2I6U Chain:C ((19-304)) | -----------------------VLELAAELKKDPVSRRPLQ--GPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKGA-LRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGL-DRVKPFRPFQLNSRLL-ALADSDAIVLHCLPAHR-------------------GDEITDAVMDGPASAVWDEAENRLHAQKALLVWLL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135378 for 2519 contacts (-53.7/contact) +
2D Compatibility (PS) -30958 + (NN) -15318 + (LL) 3232
1D Compatibility (HY) -22000 + (ID) 5650
Total energy: -206072.0 ( -81.81 by residue)
QMean score : 0.718
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