Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
3TA1 Chain:D ((1-108))
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRGEQKGIRLQFRGREVEVDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKIRTGDEE----
General information:
TITO was launched using:
RESULT:
Template:
3TA1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54384 for 677 contacts (-80.3/contact) +
2D Compatibility (PS) -12109 + (NN) -2368 + (LL) 324
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -81687.0 ( -120.66 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3TA1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TA1-query.scw
PDB file :
Tito_Scwrl_3TA1.pdb
: