Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMNDEPQSSSLDNFWMPFTANRQF-KARPRLLESAEGIHYIAQGGRRILDGTAGLWCCNAGHGRREISEAVARQIATLDYAPPFQMGHPLPFELAARLTEIAPPS-LNKVFFTNSGSESADTALKIALAYQRAIGQGTRTRLIGRELGYHGVGFGGLSVGGMVNNRKAFSANLLPGVDHLPHTLDVARNAFT-VGLPEHGVEKAEELERLVTLHGAENIAAVIVEPMSGSAGVVLPPKGYLQRLREITRKHGILLIFDEVITGFGRVGEAFAAQRWGVVPDLLTCAKGLTNGSIPMGAVFVDEKIHAAFMQGPQG-A-IEFFHGYTYSGHPVACAAALATLDIYRRDDLFQRAVELEGYWQDALF-SLRDLPNVVDIRAVGLVGGVQLAPHADGPGKRGYDVFERCFWEHDLMVRVTGDIIAMSPPLIIDKPHIDQIVERLAQAIRASV |
| 3A8U Chain:X ((14-447)) | ---------LKLDAHWMPYTANRNFLRD-PRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLT-PGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLF-GQPMQDVDHLPHTLLA-SNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGA-KNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWK-AGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276628 for 3767 contacts (-73.4/contact) +
2D Compatibility (PS) -47291 + (NN) -24439 + (LL) 916
1D Compatibility (HY) -37200 + (ID) 10300
Total energy: -394942.0 ( -104.84 by residue)
QMean score : 0.583
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