Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNKVLVTGGTGFVGMRIISRLLEQGYEVQTTIRDLSKADKVIKTMQDNGISTERLMFVEADLSQDEHWDEAMKDCKYVLSVASPVFFGKTDDAEVMAKPAIEGIQRILRAAEHA-GVKRVVMTANFGAVGFSNK-DKNSITNESHWTNEDEPGLSVYEKSKLLAEKAAWDFVENENTIVEFATINPVAIFGPSLDAHVSGSFHLLENLLNGSM-KRV-------PQIPLNVVDVRDVAELHILAMTNEQANGKRFIATADGQINLLEIAKLIKEKRPEIAQKVSTKKLPDFILSLGAKFNHQAKEGKLLLDMNRNVSNERAKTLLGWEP-IATQEEAILAAIDSMAKFHLI |
| 2RH8 Chain:A ((9-336)) | -KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK-KVSHLLEL-QELGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHF---------IKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDI--PPTWGYPASKTLAEKAAWKFAEE--NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES-ASGRYIC-CAANTSVPELAKFLSKRYPQYK--VPTDFG-D--------FP---P------KSKLIISSEKLVK-EGFSFKYGIEE-IYDESVEYFKAKGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170747 for 2605 contacts (-65.5/contact) +
2D Compatibility (PS) -32836 + (NN) -12706 + (LL) 2640
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -236449.0 ( -90.77 by residue)
QMean score : 0.571
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