Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIGTACGSGLGSSFMVQMNIESILKDLGVSDVEVEHYDLGGA--DPSAADVWIVGRDLEDSAGHLGDVRILNSIIDMDELRELVTGICQEKGLI
3NBM Chain:A ((6-65))
ELKVLVLCAGSGTSA-QLANAINEGANLTEVR-VIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKSPSKA
General information:
TITO was launched using:
RESULT:
Template:
3NBM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26087 for 380 contacts (-68.7/contact) +
2D Compatibility (PS) -6537 + (NN) -4477 + (LL) 56
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -39095.0 ( -102.88 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_3NBM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NBM-query.scw
PDB file :
Tito_Scwrl_3NBM.pdb
: