Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVEIIMPKLGVDMQEGEILEWKKQVGDVVNEGDVLLEIMSDKTNMEIEAEDSGVLLKITHGNGDVVPVTETIGYIGAEGEEVTEASSSENTSVEENATQVTSEPEKVEETSEPSVPAATSGEKVRATPAARKLAREMSIDLALVSGTGANGRVHREDVESFKGAQPRITPLARRIAEDQGVDIAEITGSGIRGKIVKNDVLAAMSPQAAEAPVETKATPTTEEKQLPEGVEVIKMSAMRKAISKGMTNSYLTAPSFTLNYDIDMTEMMALRKKLIDPIMAKTGLKVSFTDLIGMAVVKTLMKPEHRYLNASLINDAQEIELHNFVNIGIAVGLDDGLIVPVVHNADQMSLSDFVIASKDVIKKTQEGKLKSAEM-SGSTFSITNLGMFGTKTFNPIINQPNS--AILGVGATIPTPTVVDGEIVARPIMAMCLTIDHRIVDGMNGAKFMVDLKNLMENPFGLLI |
| 1B5S Chain:A ((184-425)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAKPATTEGEFPETRE-KMS-GIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKAIAAE-KGIKLTFLPYVVKALVSALRE--YPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMK-GASCTITNIGSAGGQWFTPVI--NHPEVAILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149533 for 1715 contacts (-87.2/contact) +
2D Compatibility (PS) -25601 + (NN) -6802 + (LL) 14396
1D Compatibility (HY) -12800 + (ID) 4500
Total energy: -184840.0 ( -107.78 by residue)
QMean score : 0.527
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