Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFKDATAMAQAIKQHKVSSQELVEQAIYKIEEQNVSVNAVVSKQYNEARQAAKYANASNAPFAGVPILLKDLGQNQKGQLSTSGSQLFKHYYAKQTDYLVQSFEKLGFIILGRTNTPEFGFKNISDSQLHGNVNLPFDHSRNAGGSSGGAAAAVSSGMVPIAGASDGGGSIRIPASFNGLIGLKPSRGRIPVGPSSYRGWQGASSHFALTKSVRDTKRLLYYLQSYQVESPFPLKKLSKESLFE--FSVSKPLKIAVLMDSPLKTKVSSEAKAAIKEAADFLSQKGNHLELVEQPLDGIHSMKTYCMMNSVETAAMFDGIEKSLGRSMEFSDMELMTWAMYQSGQ-RVLAKDY----SKLLDSWDQFAATMARFHENYDLILTAATNQPAPFHGQFDLDETLQKQLRHMREFSVSEQQDLIWKMFEDSMAWTPFTHQPNLTGQPSLAIPTHLTKEGLPLGVQLTAAKGREDLLLAVAELFEKEKQFKGPVCH |
| 2GI3 Chain:A ((9-467)) | --KLTIEECLKLSE---EEREKLPQLSLETIKRLDPHVKAFISVRENVS-------VEKKGKFWGIPVAIKDNIL-TLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLV-AFASSLDQIGPITKTVRDAAILMEIISGRDENDATTVN-RK-VDFLSEIEEGVSGMKFAVPEEIY-EHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSV-ATYYVIAPAEASSN-----------TRNVGFGEEVRRRIMIGTFTLSAAYYEAYFNKAMKVRRKISDELNEVLSQYDAILTPTSPVTAFKIGEIKDPL--------------------------TYYLMDIFTIPANLAGLPAISVPFGFS-NNLPVGVQVIGRRFADGKVFRIARAIEKNSPYNENGMF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54898 for 4038 contacts (-13.6/contact) +
2D Compatibility (PS) -45850 + (NN) -21394 + (LL) 5172
1D Compatibility (HY) -13600 + (ID) 4950
Total energy: -135520.0 ( -33.56 by residue)
QMean score : 0.416
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