Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSERTFNWKNKDIRAQVDVVDSKLLPTLLLRNAL-VLNPY-----V-KQWLKKNIWIYQDRIVYVGHELPNRAEEIHTIDCEGKYIVPGYIEPHAHPF-QIYNP---------Q-------TLAEYVSQYGTTTFVNDNLFLLLQSGKKKALTILNELKKQPVQYFWWSRYDLQTEV--------LNEDH-VLPFDVRKQWIEHP-DV--IQ-GGEMTGWPR--LVDGDDLMLHCMQATKKQRKRIEGHFPGASDKT----LTKMKLFGA-----DCDHEAMTGDEVMRRLE-LGYYVSLRNSSIRP-DVRKILQELHEKGFRYYDHFFYTTDGATPNFYKGGMTNELIRIAL-------EEGVPAIDAYNMASFNIAKYYQMDDYLGVVGPGRLASLNILE-DPL-----------------NPNPVTVLSKGTILRENGCDLKAFTKTDWHKGGLVPLELSYDMTMDDLQFSMPMGVKMRNAVIMEPYMIEIDNSMEQLSFDHDESYLTMLDRHGKWRVNTMIKGFASSVQGFVSSFTTTGDIVAIGKNKADMLLAFARMKEIGGGIVLAENGNILHEIPLALCGCASSEAYEDVLEKEQKLRDLLTERGYEFCDPIYTLLFLQSTHLPYIRITPRGIFDVMKKTVLFPSIMR
2PAJ Chain:A ((10-461))-------------------------PSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAPR--PGETIVDATDCVIYPAWVNTHHHLFQSLLKGEPFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHSHLS------GKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRL----PVREMADAG-V---PVSIGVDGAASN--EAADMISEVHMTWLAQRARL---ASIAEVIHWGTAGGARVMGLD-EVGKVAVGYAADIAVYRLDDPRYFGLHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1940 -159890 -82.42 -495.01
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -82.42
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_2PAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PAJ-query.scw
PDB file : Tito_Scwrl_2PAJ.pdb: