Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG-LKNVFDEAILAALEPPEPKKSRRCVLL
1M7B Chain:A ((6-183))
-VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN-------------
General information:
TITO was launched using:
RESULT:
Template:
1M7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136094 for 1440 contacts (-94.5/contact) +
2D Compatibility (PS) -19115 + (NN) -9511 + (LL) 792
1D Compatibility (HY) -18000 + (ID) 3650
Total energy: -185578.0 ( -128.87 by residue)
QMean score : 0.703
(partial model without unconserved sides chains):
PDB file :
Tito_1M7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M7B-query.scw
PDB file :
Tito_Scwrl_1M7B.pdb
: