Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKD--SEDVPMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSA-KTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
3C5C Chain:A ((20-186))
-LEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTAD---PRNC-ERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARR------------------------
General information:
TITO was launched using:
RESULT:
Template:
3C5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106805 for 1302 contacts (-82.0/contact) +
2D Compatibility (PS) -17789 + (NN) -6466 + (LL) 2700
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -144160.0 ( -110.72 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3C5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C5C-query.scw
PDB file :
Tito_Scwrl_3C5C.pdb
: