Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLLLLTLPLLSSLVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIHPQWVLTAAHCVGPN----KADPNKLRVQLRKQYLYY----HDHLLTVSQIISHPDFYI-AQDGADIALLKLTNPVNITSNVHTVSLPPASET---FPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKYHKGLNTGDNVHIVRDDMLCAGN-----EGHDSCQGDSGGPLVCKV--EDTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIYRYVPKYF |
| 3RM2 Chain:H ((1-257)) | ----------------------------IVEGSDAEIGMSPWQVMLFRKSP-QELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET---GQPSVLQVVNLPIVERPVCKDSTR---------IRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144137 for 1979 contacts (-72.8/contact) +
2D Compatibility (PS) -25307 + (NN) -9789 + (LL) 2956
1D Compatibility (HY) -18000 + (ID) 4350
Total energy: -198627.0 ( -100.37 by residue)
QMean score : 0.384
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