Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGTQRHKLWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRYVVMDFLMDHPD-YPFSDEY |
| 3H7U Chain:A ((26-325)) | -----TFFKLNTGAKFPSVGLGTWQA---SPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS--VGIKP-ENL-L-PVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELAR--VPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSP-GTTWLK---SDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA-RLVTGSFL-VHETLSPYK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193851 for 2533 contacts (-76.5/contact) +
2D Compatibility (PS) -32129 + (NN) -18598 + (LL) 776
1D Compatibility (HY) -22000 + (ID) 6100
Total energy: -271902.0 ( -107.34 by residue)
QMean score : 0.475
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