Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTV-FAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAWSLLP |
4BL1 Chain:A ((3-264)) | ----------------------KDYDELLKYYELHETIGTGGFAKVKLACHILTGEM-VAIKIMDKN-TL-------LPRIKTEIEALKNLR----HQHICQLYHVLETANKIFMVLEY-CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHK-LKLIDFGLCA----K-------SLAYAAPELIQGK---GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168469 for 1831 contacts (-92.0/contact) +
2D Compatibility (PS) -24225 + (NN) -9211 + (LL) -436
1D Compatibility (HY) -27200 + (ID) 4450
Total energy: -233991.0 ( -127.79 by residue)
QMean score : 0.445
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