Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSNIRQLFYYIKPNLHYFIIAFIAVLSSALTILLFGRGLSNIIDSGAEHNFTTKLLVTIFIVLAISLTAFIRLYFIGIGSEKVIARIRYDLYGNITDLQPSFFENTSVQDVISALITDTSVLQSIMNSSLLTILRNFIILIGSVAMLLYTNLHLTTYAAAIIPMLLIIMTSLGKKVRNYARFAQNKLSELASFSEENFRSIVTIKSFVLEENEKIRFKEHLDSVSKSYVKLVFLRAILVTLVIACVIGSLVILLFFGIKEVLSNNITVGELSSFVFYSALAAGTVNNLSDNISDLQRGFGIVERLFEFKNMKSSIMDVDNPIKICGVKKGISFNGVTFFYESQPDKPALDNVSFSIETGQAVSIIGPSGSGKSTILKLLLRFHDPGKGSITIDGYNVKSIALSNLRSLFGLVPQDHIIFSCSIMENILYG-KPGAEYEEVRQAAISAYAMEFIEKLPDKFDTFVGKRGLKLSEGQKQRIIIARAILKNPQILILDEATSALDYKSENLVQKAL--SKLMQNRTTIMITHRLSTALKTDKVIVVNHGKVEEVGTHDSLMSKGGLYAKLTKI |
2IXF Chain:D ((10-255)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLNMKGL---VKFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQ--LLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDQATSALDAGNQLRVQRLLYESPEWASRTVLLITHQLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSMVEA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160430 for 1908 contacts (-84.1/contact) +
2D Compatibility (PS) -26776 + (NN) -14757 + (LL) 28480
1D Compatibility (HY) -17600 + (ID) 4400
Total energy: -195483.0 ( -102.45 by residue)
QMean score : 0.575
|
|
|