Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPG-NIEL-NSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQC---KSRLPIHG--EYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTSKK---------HVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY |
| 4GNJ Chain:A ((28-267)) | ---IVAANWKCNGTTASIEKLVQVLNEHQIDHDVQCVVAPSFVHIPMVQAKLCNPKYAVSAENA-IAKSGAFTGEVSMPILKDLGVSWVILGHSERRTYYGETDGVVAQKVADAYNQGFMVIACIGETLQQREANQTAKVVLSQTAAIAAKLPKEAWSQIVLAYEPVWAIGT-KVATPEQAQEVHALLRQWVSEKIGNGVATKLRILYGGSVTAGNAKTLYMKPDINGFLVGGASLK-PEFRDIIDATR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114892 for 1764 contacts (-65.1/contact) +
2D Compatibility (PS) -23827 + (NN) -8535 + (LL) 748
1D Compatibility (HY) -17200 + (ID) 4200
Total energy: -167906.0 ( -95.18 by residue)
QMean score : 0.496
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