Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRD------EPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGF---AKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS |
| 3TR9 Chain:A ((26-293)) | -SEPAVMGIINVSPNSFYHPH--LDLNSALRTAEKMVDEGADILDIGGEATNPFV-SPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQRALQL-DDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQP--PENRLFGSIAADVLAVYHGASIIRTHDVKATREAIKIATYTRSVD------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129730 for 2155 contacts (-60.2/contact) +
2D Compatibility (PS) -28289 + (NN) -22463 + (LL) 812
1D Compatibility (HY) -12400 + (ID) 4000
Total energy: -196070.0 ( -90.98 by residue)
QMean score : 0.726
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