Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANS---LGFE-SDITFTLRNLEDTDAIDQFIKANQVDKVLVIGAGYVSLEVLENLYERGLHPTLIHRSDKI-NKLMDADMNQPILDELDKREIPYRLNEEIDAINGNE-IT-FKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQ--FDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADK-RIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK |
| 3ICS Chain:A ((36-478)) | SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKLIFNKDSGKIYGAQTLGR-DGVDKRMDVIATAIKANLTVLDLPDLELSYAPPYSSAKDPVNMVGY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260217 for 3755 contacts (-69.3/contact) +
2D Compatibility (PS) -46514 + (NN) -8797 + (LL) 552
1D Compatibility (HY) -39200 + (ID) 8250
Total energy: -362426.0 ( -96.52 by residue)
QMean score : 0.437
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