Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQTLAQTKQISQSHTFDVSQSHHKTPDDTNSHSVIYSTQNLDLWYGENHALQNINLDIYENQITAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILY---RDQDIFDQKYSKEQLRTNVGMVFQQPNPFPK-SIYDNITYGPKIHGIKNKKVLDEIVEKSLRGAAIWDELKDRLHTNAYS-LSGGQQQRVCIARCLAIEPEVILMDEPTSALDPISTLRVEELVQELKEK--YTIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSNKKTEDYISGRFG |
| 1L2T Chain:B ((19-223)) | -------------------------------------------------YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCL-----DKPTEGEVYIDNIKTNDLDDDELTKIR-RDKIGFVFQQFNLIPLLTALENVEL-PLIFKYRGAMSGEERRKRALECLKMA-ELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEV--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88525 for 1582 contacts (-56.0/contact) +
2D Compatibility (PS) -21617 + (NN) -8687 + (LL) 3596
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -131183.0 ( -82.92 by residue)
QMean score : 0.484
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