Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHLFEGVGVALTTPF-TNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASFQAKALGADAIMLITPYYNKTNQRGLVKHFEAITDAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQ-----QSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLEF-GNYELRLPLVSLEDTDTKVLREAYDTFKAGENE |
| 4PFM Chain:B ((1-276)) | --HMINGSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQTVKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVAASTDIPQILYNVPGRTAVDMLPETIAQLVEVPNIIGV-DATGDVARVKQLRD-LCGNDFLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIK---GLFSALFCEANPIPVKWAAHKMGLISQGDIRLPLTELS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154592 for 2365 contacts (-65.4/contact) +
2D Compatibility (PS) -28878 + (NN) -11523 + (LL) 1412
1D Compatibility (HY) -21600 + (ID) 4950
Total energy: -220131.0 ( -93.08 by residue)
QMean score : 0.545
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