Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDS-------------RFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEG---IISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASV-----GDINLSEP--KALIGFAGRRVIEQTIN-EKL---P--------------DDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK |
3GF3 Chain:A ((310-564)) | ---------------------------------------------EDLYSIIP-MNQKRPYDIYEVIARLFDNSEFSEYKKG------------------------YGPEMVTGLAKVNGLLVGVIANVQGLLMNYPEYKQNSVGIGGKLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYS---IENSKLPSLEITIRKASAAAH--YVLGGPQGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKA-QPIIGKMNDMIQMYTDKSRPKYCTEKGMVDEIVDMTEVRPYIQAFTEAAYQN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100358 for 1611 contacts (-62.3/contact) +
2D Compatibility (PS) -22305 + (NN) -5041 + (LL) 4380
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -133374.0 ( -82.79 by residue)
QMean score : 0.472
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