Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTLNACK-RADAILLGAIGGPK-----WTDPNNRPEQGLLKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNN---HEALDSLTYTREEIE-RIVHVAFKLAASR-------------RGKLTSVDKENVLA-SSKLWRKVVNEVSQL---YPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQT-TADLGGKLNTTDIFEILSQKLNH |
| 3TY3 Chain:B ((16-356)) | -------IPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFE---KALPERTVERLKTECNAALFGAVQSPTHKVAGYSSP-------IVALRKKMGLYANVRPVKSLDGAKG---------KPVDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANV-GDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALML-EFMGHQDAAADIYTAVDKVLTEGKVLTPDLGGKSGTNEI---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150813 for 2658 contacts (-56.7/contact) +
2D Compatibility (PS) -33510 + (NN) -17895 + (LL) 2408
1D Compatibility (HY) -25600 + (ID) 5750
Total energy: -231160.0 ( -86.97 by residue)
QMean score : 0.440
|
|
|