Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVSEALKQV--DMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAM-EADHVIVMNKGTVYKEGTATEIFDHAEELTRIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL |
4ZIR Chain:A ((23-228)) | -----------------------ALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGE----KGYE-IRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVPL-VKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGK-TVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83978 for 1548 contacts (-54.2/contact) +
2D Compatibility (PS) -21752 + (NN) -8287 + (LL) 5128
1D Compatibility (HY) -17600 + (ID) 3750
Total energy: -130239.0 ( -84.13 by residue)
QMean score : 0.531
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