Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDF--LLNN-SGNIPKSI---SQNVTLISSSSNIPNDI------TKDFLLSLLKSKF----ENNRQTFDKIYNILNIEAIPSNVLLKNLSDGQKQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDLSALPGKYFIFKDLQIEEYQSKEEVINDYINL |
| 3RLF Chain:A ((4-226)) | VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLL-DRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKR-LGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89991 for 1580 contacts (-57.0/contact) +
2D Compatibility (PS) -21995 + (NN) -5170 + (LL) 112
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -127294.0 ( -80.57 by residue)
QMean score : 0.497
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