Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISRKEYVSMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTG-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ---------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAE-EYSMNLGFLAKGNA----SNDASLADQIEAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAG--CV-----------------ED--------TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAS-TNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVI---T-----RTWQT-ADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFG----------------------VKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFAHHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF |
| 3MPG Chain:A ((1-423)) | -----------------------------------------------------------------MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT-------------ADNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVP-------DCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFAFTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKG---SVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFK---MNPPL---------RGKEDHEALIEGLL-DGTIDMIATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTN-L------VKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTADITIIDLEQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKESA----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96854 for 2944 contacts (-32.9/contact) +
2D Compatibility (PS) -37253 + (NN) -8081 + (LL) 12016
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -142272.0 ( -48.33 by residue)
QMean score : 0.348
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