Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGNVEIKNQVVVAPMAGISN----SA----FRLTVK--EFGAGLVCCEMISDKGIAYR--N------A---KTLDML--YIDEKEKPLSLQIFGG------------------------EK------------ETLVEAAKFVAENTTADIIDINMG---------CPVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAV--DKPVTVKMRIGWDE----EHVFAIENALAAERAGAAAVAMHGRTRVQ--MYEG-SANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD |
| 3KRU Chain:A ((7-325)) | PLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANL-AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIK-DKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTYTSKE--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142836 for 1903 contacts (-75.1/contact) +
2D Compatibility (PS) -25508 + (NN) -6538 + (LL) 7916
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -179016.0 ( -94.07 by residue)
QMean score : 0.417
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