Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISM-ENVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT |
3STJ Chain:A ((11-334)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLPSLAPMLEKVLPAVVSVRVEGT----------QPFEGLGSGVIINA--SKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLG--QTATSGIVSALGRSGLNL-------EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADI---AK-AFNL--DVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT--TEPGTKVKLGLLRNGKPLEVEVTLDTS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88932 for 2614 contacts (-34.0/contact) +
2D Compatibility (PS) -31665 + (NN) -2538 + (LL) 5112
1D Compatibility (HY) -18400 + (ID) 5600
Total energy: -142023.0 ( -54.33 by residue)
QMean score : 0.528
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