Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKQAILNNIHQTWQEEANAISRLPEVTSE-----EALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSF------NCIERPAVFLTPSDA--------------VHGT-LGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
2XBL Chain:A ((15-194))
--------------AEAQRVMAAMLADERLLATVRKVADACIASIAQGG-KVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTP----K----IQEGHLVLGHIVCGLVEHSI-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2XBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113486 for 1262 contacts (-89.9/contact) +
2D Compatibility (PS) -16640 + (NN) -7385 + (LL) 2300
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -140811.0 ( -111.58 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2XBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XBL-query.scw
PDB file :
Tito_Scwrl_2XBL.pdb
: