Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLNIEGAKLSYQKVGQGPILIFIPGANGTG---DIFLPLAEQLKTSFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGSSSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAMQLFGE--TLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYT-SSNISLDDFKPYVHQITLLNGTDSKGSFPQDVNAFIAKQ-LGLTIVDIPG-GHLGYIQKPAGFAKVLLSIWG |
| 1IUP Chain:A ((9-271)) | --SILAAGVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE---------NYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE-GLNAVWG-YTPSIE--NMRNLLDIFAYDRSLVTDELARLRYEASI-------QPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVP-LSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125867 for 2232 contacts (-56.4/contact) +
2D Compatibility (PS) -27793 + (NN) -16005 + (LL) 1760
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -175355.0 ( -78.56 by residue)
QMean score : 0.399
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