Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTTLMEVIAGAKEATSGTVTTQG-------------KLAYIKQL----------------------------------STDTSTKSGGEKTRKATQHAMRQNPS--VLLADEPTSNLDVESVKHLERQWSDF---HGALIIISHDRAFLDALCTEIWEI------KNQKIHVYKGNYHAYLEQKQQQENQAELAYKEFKNKKKQLQASQTHHEIEAGRIVKPGKRLNNKEASAFKAGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKIITPDNRVIKKGNTILSAKETAYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEII---------------Q----ENPNLLCNPQAKIAYFDQELNG--------------------------------------------------------------------------------------------LNQTKSLLENISEISV-QTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLLLSMLLLSDA---NFLILDEPTNYLDIYAMEALETLIKQF---AGTVLFVSHDRTFVNHVAEQLLVI------ENNEMNFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAILEQDYQEIITKRQQFS |
| 3PIH Chain:A ((355-902)) | ---------------VPKVQRWHRET---EMKEWLEKNFIVQRTCSVCGGRRLNREALSVKINGLNIHEFTELSISEELEFLKNLNLTEREREIVGELLKEIEKRLEFLVDVGLEYLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDLGNTVIVVEHDEEVIR-NADHIIDIGPGGGTNGGRVVF-QGTVDELLKNPDSSL---TG-------------EYL-----------------------------SGK---------------RKI---TVNK-----------TRR--LPYASLKIKGVR-----HNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYPALMNLLHKTKLPAGEFDSIEGHENID---KMIAIDQSPIGRTPRSNPATYTKVFDEIRSLFAMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRETLEITYKGKNISDILDMTVDEALEFFKNIPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVIK-NADHIIDLGPEGGKEGGYIV-ATGTPEEIAK------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32762 for 2566 contacts (-12.8/contact) +
2D Compatibility (PS) -38221 + (NN) -7924 + (LL) 12700
1D Compatibility (HY) -16000 + (ID) 3500
Total energy: -85707.0 ( -33.40 by residue)
QMean score : 0.295
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