Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHRE-----MKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDVIGL-----------------------------------------------------------------------------DASDAVLASAKSGIGIEDILEQIVEKVPEPSG---------DVNKPLKALIFDSVFDAYRGVIANIRIMDGVVKAGDRIKMMSNGKEFEVTEVGVFSPK-ATPRDELLVGDVGYLTAAIKNVGDTRVGDTITLANNPAEEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQFE-AETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLIT-----TAPSVIYHVNLTDGSNIVVDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVSIVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFIVHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK |
| 3VQT Chain:A ((22-499)) | ---SRLEREAARRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKAR------------------VTTSVMQFPYR-----DRVVNLLDTPGHQDFSEDTYRVLTAVDSALVVIDAAKGVEAQTRKLMDVCRMRATPVMTFVNKMDREALHPLDVMADIEQHLQIECAPMTWPIGMGSSFKGTYDLLHKQLHLFSQSGIVIHGADDPQLDEYLGDQAEQLRMDLALLEEAGTPFDEERYLKGELTPVFFGSAINNFGVREMLDMFVEFAPGPQPRPAATRVVEPGEEAFTGVVFKIQAN----RMAFLRICSGTFTRGMRLKHHRTGKDVTVANATIFMAQDRTGVEEAFPGDIIGIP----NHGTIKIGDTFTESKE--VLKFVGIPNFAPEHFRRVRLKNPLKAKQLQKGLEQLAEEGAVQLFRPLVNND-----YILGAVGVLQFDVIVARLADEYGVDAVYEGVSTHTARWVYCEDKKI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -192897 for 2807 contacts (-68.7/contact) +
2D Compatibility (PS) -37402 + (NN) -6390 + (LL) 20228
1D Compatibility (HY) -18800 + (ID) 4500
Total energy: -239761.0 ( -85.42 by residue)
QMean score : 0.458
|
|
|