Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQKIQVENGVLKTPNNPVIPFIEGDGTGPDIWAAAKRVLDAAVKKAYNGEKEIAWKEVLAGEKAFKQTGEWLPQATLDTIDEYLIAIKGPLTTPIGG------GIRSLNVALRQELDLYVCLRPVRYFKGVP--SPVK--RPEDTDMVIFRENTEDIYAGIEFKEGSIESKKLIDFLKSEFGVDKIRFPETSGIGIKPISKEGTERLVRSAIEYAIKEGRKSLTLVHKGNIMKFTEGAFKNWGYDLCEREYGDKVFTWNEYDRIKEAEGTEVADAKQNEALAAGKILVKDSIADIFLQQILTRPAEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYLTGHAIFEATHGTAPKYAGLDKVNPSSVILSGTLLLEH-IGWGEAAALINQSMEKTIAAKTVTYDFARLMDGATEVKCSEFADELIKNF |
2Y3Z Chain:A ((3-347)) | ----------------SMKVAVLPGDGIGPEVTEAALKVLRALDEA--EG-LGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDGLPRKIRPETGLLSLRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRG-----------------------MSEAEAWNTERYSKPEVERVARVAFEAARKR-RKHVVSVDKANVLEV-GEFWRKTVEEVG-RGYPD--------------------------------VALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLG--RGTPVFEPVHGSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLE-TPPPDLGG------SAGTEAFTATVLRHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160594 for 3021 contacts (-53.2/contact) +
2D Compatibility (PS) -36277 + (NN) -13023 + (LL) 5944
1D Compatibility (HY) -14000 + (ID) 5000
Total energy: -222950.0 ( -73.80 by residue)
QMean score : 0.622
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