Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENLDKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRIYTPQED-GPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTG-ARVVTVDYRLAPENPFPAAVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQILLYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIRSKDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNS--EATDETYELISEFLEEK
2HM7 Chain:A ((45-308))----------------------------------------------------------------------------------VAEVREFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAK-DGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHP---PASIEENAEGYLLTGGMMLWFRDQYLNSLEEL-THPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA


General information:
TITO was launched using:
RESULT:

Template: 2HM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156958 for 2364 contacts (-66.4/contact) +
2D Compatibility (PS) -28265 + (NN) -17103 + (LL) 6772
1D Compatibility (HY) -20400 + (ID) 5350
Total energy: -221304.0 ( -93.61 by residue)
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_2HM7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HM7-query.scw
PDB file : Tito_Scwrl_2HM7.pdb: