Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTKKPEINTILQVTPDPHSLPAAMATEDLHVYYGDNHA--IKGVDLTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRMEGQILYDGININRKEVDLYNVRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMERVEKSLRRAALWDEVKD-------DLGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKYTIIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQEKQTEDYISGNFG |
| 2HYD Chain:A ((349-562)) | ---------------------------------YNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDV-----TSGQILIDGHNI--KDFLTGSLRNQIGLVQQDNILFSDTVKENILLG-------RPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITH-ADKIVVIENGHIVETGTHREL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85295 for 1562 contacts (-54.6/contact) +
2D Compatibility (PS) -21975 + (NN) -5324 + (LL) 3604
1D Compatibility (HY) -10400 + (ID) 3650
Total energy: -123040.0 ( -78.77 by residue)
QMean score : 0.457
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