Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
3AZ9 Chain:D ((11-151))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFA------
General information:
TITO was launched using:
RESULT:
Template:
3AZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91205 for 971 contacts (-93.9/contact) +
2D Compatibility (PS) -14255 + (NN) 1049 + (LL) 380
1D Compatibility (HY) -17600 + (ID) 3300
Total energy: -124931.0 ( -128.66 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3AZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZ9-query.scw
PDB file :
Tito_Scwrl_3AZ9.pdb
: