Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVKLNNGVEVPILGFGTYQITDA--AEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGI----AASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIHQPFN---------------------DVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFN---EVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGKND---------IFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV |
| 4JTR Chain:B ((6-302)) | -QCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFN-HRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRN----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136571 for 2169 contacts (-63.0/contact) +
2D Compatibility (PS) -28401 + (NN) -14422 + (LL) 1972
1D Compatibility (HY) -25600 + (ID) 4850
Total energy: -207872.0 ( -95.84 by residue)
QMean score : 0.602
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