Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLVATAPR---VAVLVEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVERGSKVTEYALGDIVCS----YGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYD-PAQFAMSGVRD-AHVRAGDYVVVVG-LGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNN-AKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL |
| 3JYN Chain:A ((2-325)) | AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNF-IDTYYRSGLYPA-----------------------PFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPE-AN--LVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLG-ILAQKDSVYVTRPTLGSYA---NNAQNLQTMADELFDMLASGKLKVDG--IEQYALKDAAKAQIE-LSARR-TTGSTILIP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3JYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139328 for 2750 contacts (-50.7/contact) +
2D Compatibility (PS) -34422 + (NN) -11704 + (LL) 2116
1D Compatibility (HY) -5200 + (ID) 3100
Total energy: -191638.0 ( -69.69 by residue)
QMean score : 0.423
|
|
|