Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVELNLNHIYKKYPSASHYSVEDFDLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISEGELKIDGEVVNDKSPKDRDI---------------AMVFQNYALYPHMTVYDN-MAFGLKLRKFSKQEIDKRVREAAANIGLTEFLERK-PADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRAEIAKIHQRI---GSTTIYVTHDQTEAMTLADRIVIMSATKNPDGDGTIGKIEQVGSPQELYNLPANKFVAGFIGSPSMNFFKVKVENGMIISEDGLRIAIPEGQEKLLESRGYKGKELIFGIRPEDISSNLLVQDTYPNANVEAEVLVSELLGSETMLYVKLGQTEFASRVEARDFHNPGEKVNLTFNVAKGHFFDADTEQAIR |
1B0U Chain:A ((45-253)) | -------------------------------------------KSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPEL----VGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQ----------GKIEEEGDPEQVFGNPQSPRLQQFLKGSLKKLEH-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63730 for 1328 contacts (-48.0/contact) +
2D Compatibility (PS) -20153 + (NN) -3028 + (LL) 10016
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -95195.0 ( -71.68 by residue)
QMean score : 0.478
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