Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKSRG-LVRF-F---------FSI-LAVGALITSIVGFA--L-KWGEYR---------GLFLTFEA-GQIFSVLFWFIGVGMIFSVISQMGFFVF----------L-TVH---------RFALEILR---SSSLWNLLQLFFILFVAFDLMYVRF----LFFGESGESLAGYAW-LPVFLLI--FGVITAYIKQKQSSKKTFVSSLFLMVVITALEWFPALRVNDEDWLYLMLFPLMACNAFQLLMLPKFAAK |
| 4RHO Chain:A ((4-259)) | DKIHHHHHHENLYFQGMEIKAMFRDVSLSSRNFSEMLSRESKVVAALAAKSPLMAHANWRLKGNSLEEATLYPAFDADGSPSTPALAVLNEEQRGKKHSASHAAIWNGNTRPNEGASMSCHVSDEKVLPDRFSTRLGVPDCYAKSQDLADVVTTIVAAFNPLVVEASPEGYFDKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVSAKGKQTGTIIVSVTDAP---FSVDNPEHVAIANRIEIRLVDQD-----LLPAYVDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236615 for 1357 contacts (-174.4/contact) +
2D Compatibility (PS) -18924 + (NN) 6344 + (LL) 1184
1D Compatibility (HY) 1200 + (ID) 1650
Total energy: -248461.0 ( -183.10 by residue)
QMean score : 0.202
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