Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQ-GDTKMSDTDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE
3O0L Chain:A ((35-107))---------------------------------------------------------------AEAGFLRARGTIISKSPKDQRLQ-YKFTWYDINGATVEDE-----GVSWKSLKLHGKQQMQVTALSPNATAVRCELYVR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3O0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 270 -18159 -67.26 -252.21
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -67.26
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_3O0L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O0L-query.scw
PDB file : Tito_Scwrl_3O0L.pdb: