Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMKQFEIAAIPGDGVGKEVVAAAEKVLHTAAEVHGGLSFSFTAFPWSCDYYLEHGKMMPEDGIHTLTQFEAVFLGAVGNPK-------LVPDHISLWGLLLKIRRELELSINMRPAKQMAGIT--SPLLHPN---DFDFVVIRE-NSEGEYSEVGGRIHRGDDEIAIQNAVF-TRKATE----RVMRFAFELAKKRRSHVTSATKSNGIYHAMPFWDEVFQQTAADYSGIETSSQHIDALAAFFVTRPETFDVIVASNLFGDILTDISSSLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAKLMLDH-FGEEELGAKILDVMEQVTADGIKTRDIGG----QSTTAEVTDEICSRLRKL
4XXV Chain:B ((9-363))-----MKIAVLPGDGIGPEIVNEAVKVLNALDE-----KFELEHAPVGGAGYEASGHPLPDATLALAKEADAILFGAVGDWKYDSLERALRPEQA-----ILGLRKHLELFANFRPAICYPQLVDASPL-KPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGEREGFDTMRYSEPEVRRIAHVAFQAAQKRAKKLLSVDKSN-VLETSQFWRDVMIDVSKEYADVELSHMYVDNAAMQLAKAPKQFDVIVTGNMFGDILSDEASMLTGSIGMLPSASLDKNNK--GLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKTVLEQGYRTGDIATPGCRQVGTAAMGDAVVAAL---


General information:
TITO was launched using:
RESULT:

Template: 4XXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1923 -178300 -92.72 -537.05
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -92.72
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_4XXV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XXV-query.scw
PDB file : Tito_Scwrl_4XXV.pdb: