Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARKKKKKHEDEHVDESWLVPYADILTLLLALFIVLYASSSIDAAKFQMLSKSFNEVFTGGTGVLDYSSVTPPENESDGIDEVKKEKEEKEKNKKEKEKAADQEELENVKSQV-EKFIKDKKLEHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKEISNLLVINPPRNIIISGHTDNM-PIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNKTAEGRSKNRRVEVLILPRGAAETNEK
3KHN Chain:A ((7-172))-------------------------------------------------------------------------------------------------RLQRELIEAQRQTYNEMRTYFTVNGVEGVIGAVFDEGVITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGA-GIEPARLTATGLGELDPLFPNTSDENRARNRRVEFVLEREGHHHH---


General information:
TITO was launched using:
RESULT:

Template: 3KHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 663 -52035 -78.48 -325.22
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -78.48
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_3KHN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KHN-query.scw
PDB file : Tito_Scwrl_3KHN.pdb: