Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSKLSILMIGFALSVLLAACGSNDAKEEKTDTGSKTEATASEGEELYQ-QSCVGCHGKDLE----------------------------GVSGPNLQEVGGKYDEHKIESIIKNGR-----GNMPKGLV-------------------------------------DD-NEAAVIAKWLSEKK
3MK7 Chain:B ((48-196))-----------------------------------PYTALQLEGRDLYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPSYPWLVENTLDGKDTAKKMSALRMLGVPYTEEDIAGARDSVNGKTEMDAMVAYLQVLG


General information:
TITO was launched using:
RESULT:

Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 205 11820 57.66 153.51
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : 57.66
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_3MK7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MK7-query.scw
PDB file : Tito_Scwrl_3MK7.pdb: