Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHA-AGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
4H3U Chain:A ((25-150))
--------MTTPEIVTAWAAA----WTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIEN---VHVTITKAYRAGD--HVTIEAVYGGHIKGAPTPFAVPMATLLRT-RGEEITSDQDYYSLSSVLAQSGLP------------------------
General information:
TITO was launched using:
RESULT:
Template:
4H3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53713 for 918 contacts (-58.5/contact) +
2D Compatibility (PS) -14082 + (NN) -9010 + (LL) 2716
1D Compatibility (HY) -400 + (ID) 750
Total energy: -75239.0 ( -81.96 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_4H3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3U-query.scw
PDB file :
Tito_Scwrl_4H3U.pdb
: