Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGTSSMGLPPGPRLSGSVQAVL-MLRHGLRFLTACQRRYGSVFTLHVAGFGHMVYLSDPAAIKTVFAGNPSVFHAGEANSMLAGLL-GDSSLL-LIDDDVHRDRRRLMSPPFHRDAVAR---------QAGPIAEIAAANIAGWPM----AKAFAVAPKMSEITLEVILRTVIGASDPVRLAALRKVMPR---LLNVGPWATLALANP--SLLNNRLWSRLRRRIEEADALLYAEIADRRADPDLAARTDTLAMLVRAADE----DGRTMTERELRDQLITLLVAGHDTTATGLSWALERLTRHPVTLAKAVQAADASAAGD-----PA--GDEYLDAVAKETLRIRPVVYDV-GRVLTEAVEVAGYRLPAGVMVVPAIGLVHASAQLYPDPERFDPDRMVGATL------SPTTWLPFGGGNRRCLGATFAMVEMRVVLREILRRVELSTTTTSGERP-KLKHVIMVPHRGARIRVRATRDVSATSQATAQGAGCPAARGGGPSRAVGSQ |
2HI4 Chain:A ((12-481)) | ---PKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRI-GSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212631 for 3517 contacts (-60.5/contact) +
2D Compatibility (PS) -46784 + (NN) -23381 + (LL) 1756
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -302940.0 ( -86.14 by residue)
QMean score : 0.440
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