Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVRVGDPELVLDPYDYDFHEDPYPYYRRLRDEAPLYRNEERNFWAVSRHHDVLQGFRDSTALSNAYGVSLDPSSRTSEAYRVMSML-AMDDPAHLRMRTLVSKGFTPRRIRELEPQVLELARIHLDSALQTESFDFVAEFAGKLPMDVISELIGVPDTDRARIRALADAVLHREDGVADVPPPAMAASI-----ELMRYYADLIAEFRRRPANNLTSALLAAELDGDRLSDQEIMAFLFLMVIAGNETTTKLLANAVYWAAHHPGQLARVFADHSRIPMWVEETLRYDTSSQILARTVAHDLTLYDTTIPEGEVLLLLPGSANRDDRVFDDPDDYRIGREI-GCKLVSFGSGAHFCLGAHLARMEARVALGALLRRIRNYEVD-DDNVVRVHSSNVRGFAHLPISVQAR |
2XFH Chain:A ((33-401)) | -------------------------WLGTMREKQPVWQDR-YGVWHVFRHADVQTVLRDTATFSS------DPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLADA--GESFDLVDVLAFPLPVTIVAELLGLPPMDHEQFGDWSGALVDIQ--MDDPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERLRHFEQIVLGTRHLPV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226049 for 2920 contacts (-77.4/contact) +
2D Compatibility (PS) -39534 + (NN) -22462 + (LL) 1920
1D Compatibility (HY) -20800 + (ID) 6650
Total energy: -313575.0 ( -107.39 by residue)
QMean score : 0.432
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