Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRYDSLLQALGNTPLVGLQRLS--PRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNP-SWVMLYQYGNPANTDSHYCGTGPELLADLP-EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPR-------YGEGVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSLDDAETALEGQLWA |
| 4JBL Chain:B ((14-319)) | ---YHNILETIGGTPLVELHGVTEHPRIKKG-----TRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHY-TANEIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILA--GLKEAEKPENEGKTIVIIVPSCGERYLSTDLY----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109216 for 2756 contacts (-39.6/contact) +
2D Compatibility (PS) -31659 + (NN) -5189 + (LL) 1380
1D Compatibility (HY) -23200 + (ID) 5300
Total energy: -173184.0 ( -62.84 by residue)
QMean score : 0.514
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